Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924619.1_cds_XP_016472948.1_65127
CDS Infomation

[gene=LOC107794901] [db_xref=GeneID:107794901] [protein=patatin-like protein 1] [protein_id=XP_016472948.1] [location=complement(join(22457..22523,22679..22854,23012..23314,23417..23578,24030..24216,24342..24523,24751..24894))] [gbkey=CDS]
Sequence

ATGGAAAACGAAGCAGGATCATCTCGAGTTGCAATGCCGCCTCCCAATACAGGGACGCTG
ATAACCATTCTAACCATCGATGGGGGAGGAATAAGAGGAATCATTCCAGGAGTTATCCTT
TCATATCTTGAATCACAACTTCAGGAGTTGGACGGTAAAGATGCAAGAATCGCGGATTAT
TTTGACTTGATTGCAGGAACAAGCACTGGTGGCCTTGTAACAGCGATGTTAGCTGCACCA
AACAAAGATAAACGCCCTTTATACGCTGCCAAAGATATTACTCCGTTTTATCTTGAGCAC
TCTCCCAAAATCTTTCCCCAGATGGGTGGACCATTAGCGGGGATCATAAATCTAACCAAA
GCAATGGGAGGACCTAAGTATGACGGGAAGTATCTTCACAAACTTATAAAGGGTATCTTA
GGAGGTACCAGGTTGCATGATACATTAACTGCCGTCGTAATTCCAACTTTTGACATCAAG
AAACTTCAGCCAGTTATTTTCAGCTCATATGAGGCAATCTTGAAACCTGATTTGGATGCA
GAACTGGCGGACATTTGCATTAGTACCTCGGCAGCACCAACTTTTCTACCTGCCTATGGT
TTCAAGAACAAGGATGCTCAAGATAGTGAACGAGAATTCAACCTAATTGATGGTGGTGTC
GCTGCTAATAACCCAACTTTGGTCGCAATTGGTGAGGTGACCAAGCAAGTATTGATGCAG
CACGGAGACTTATTCCCTATCAAGCCAATGGATTATGGTCGTTTTCTGGTAATATCACTT
GGGACAGGCAATGCAAAGAACGAGCACAAATTCAATGCCCAAATGGCTGCCAAGTGGGGA
TTACTTAGCTGGCTATTAAATAACAACTCTACACCTATTATAGATGCTTTTAATCAAGCA
AGCGCTGATATGGTTGATTATCACAACTTTGTGGTTTTCAAAGCTCTTCACTCGGACGAT
AAGTACCTTCGTATCCAGGATGACACCTTGACGGGGAACTTGGCCTCAGTTGACATAGCC
ACAAAGGAAAACTTACAAAGCCTCGTCAAGGTAGGAGAACATCTGCTGGAAAAGCCAGTT
TCAAAGATAAACCTGGACAAGGGAGTTTATGAGGCAGTTGAAAATGGAGGAACCAACAAG
GAAGCTCTTCAGAGGTTTGCGAAGATACTGTCGGACGAGAGAAAATTCCGCGAGTCCAAT
GCCAGTAGCCGGTTGGTCTAG

Peptide Sequence

PEP ID

XP_016472948.1
PEP Infomation

PREDICTED: patatin-like protein 1 [Nicotiana tabacum]
Sequence

MENEAGSSRVAMPPPNTGTLITILTIDGGGIRGIIPGVILSYLESQLQELDGKDARIADY
FDLIAGTSTGGLVTAMLAAPNKDKRPLYAAKDITPFYLEHSPKIFPQMGGPLAGIINLTK
AMGGPKYDGKYLHKLIKGILGGTRLHDTLTAVVIPTFDIKKLQPVIFSSYEAILKPDLDA
ELADICISTSAAPTFLPAYGFKNKDAQDSEREFNLIDGGVAANNPTLVAIGEVTKQVLMQ
HGDLFPIKPMDYGRFLVISLGTGNAKNEHKFNAQMAAKWGLLSWLLNNNSTPIIDAFNQA
SADMVDYHNFVVFKALHSDDKYLRIQDDTLTGNLASVDIATKENLQSLVKVGEHLLEKPV
SKINLDKGVYEAVENGGTNKEALQRFAKILSDERKFRESNASSRLV

Transcript Sequence

Gene sequence data has not been registered.